6/18/2023 0 Comments Install samtools on macBelow, I discuss some successes and problems I’ve run into with installing this software, and the limited but generally successful set of solutions that I have found. Instructions for installing dDocent are given at the pipeline’s Bioconda Download and Install page, and are claimed to be “So easy your grandfather could do this….” I’ve recently made attempts at installing dDocent on two different Linux-based high performance computing clusters, or “supercomputers,” one at VCU’s CHiPC facility, and one at BYU’s FSL facility. ![]() dDocent is nice because it pulls together several top-of-the-line existing tools, and because it provides reference-based and de novo assembly options. ![]() Jon Puritz and some other developers have hacked out a nice pipeline, named dDocent (pronounced “docent”), for genomic assembly, read mapping, and SNP calling using NGS data from the RAD-seq family of sequencing strategies.
0 Comments
Leave a Reply. |